SMTL ID : 6i15.1

CRYSTAL STRUCTURE OF FASCIN IN COMPLEX WITH COMPOUND 11

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.91 Å

Oligo State

monomer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: I.17, N.18, N.21, R.100, S.133, Q.184 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.17, A:R.100 EDO.3: 6 residues within 4Å: Chain A: V.169, W.171, R.308, T.309, H.310, G.312 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.308, A:T.309, A:G.312

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 7 residues within 4Å: Chain A: W.101, V.134, Y.186, T.213, L.214, F.216 Ligands: GZT.4 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.134, A:L.214, A:F.216 Hydrogen bonds: A:V.134, A:L.214 Water bridges: A:V.134, A:V.134

1 x GZT: 1-[[2,2-bis(fluoranyl)-1,3-benzodioxol-5-yl]methyl]-~{N}-methyl-2-oxidanylidene-pyridine-3-carboxamide(Non-covalent)

GZT.4: 12 residues within 4Å: Chain A: F.14, L.16, L.48, I.93, W.101, L.103, V.134, L.214, E.215, F.216, R.217 Ligands: ACT.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.48, A:W.101, A:W.101, A:V.134, A:E.215, A:F.216 Hydrogen bonds: A:F.216 pi-Stacking: A:F.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Francis, S. et al., Structure-based design, synthesis and biological evaluation of a novel series of isoquinolone and pyrazolo[4,3-c]pyridine inhibitors of fascin 1 as potential anti-metastatic agents. Bioorg.Med.Chem.Lett. (2019)

Release Date

2019-02-27

Peptides

Fascin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fascin

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