SMTL ID : 6i17.1

CRYSTAL STRUCTURE OF FASCIN IN COMPLEX WITH COMPOUND 24

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.56 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 6 residues within 4Å: Chain A: W.101, V.134, Y.186, T.213, L.214 Ligands: GZW.3 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.134, A:L.214 Hydrogen bonds: A:V.134, A:L.214 Water bridges: A:V.134, A:V.134

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: I.17, N.18, R.100, S.133 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.100, A:S.133

1 x GZW: 2-[(3,4-dichlorophenyl)methyl]-~{N}-(1-methylpyrazol-4-yl)-1-oxidanylidene-6-piperidin-4-yl-2,7-naphthyridine-4-carboxamide(Non-covalent)

GZW.3: 17 residues within 4Å: Chain A: F.14, L.16, L.48, A.58, V.60, I.93, A.95, W.101, L.103, V.134, T.213, L.214, E.215, F.216, R.217, R.224 Ligands: ACT.1 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.48, A:V.60, A:I.93, A:W.101, A:V.134, A:E.215, A:F.216 Hydrogen bonds: A:E.215, A:F.216 Water bridges: A:S.57, A:A.58, A:E.215 pi-Stacking: A:F.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Francis, S. et al., Structure-based design, synthesis and biological evaluation of a novel series of isoquinolone and pyrazolo[4,3-c]pyridine inhibitors of fascin 1 as potential anti-metastatic agents. Bioorg.Med.Chem.Lett. (2019)

Release Date

2019-02-27

Peptides

Fascin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fascin

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