SMTL ID : 3m37.1

Factor XA in complex with the inhibitor 1-[2-(aminomethyl)phenyl]-N-(3-fluoro-2'-sulfamoylbiphenyl-4-yl)-3-(trifluoromethyl)-1H-pyrazole-5-carboxamide (DPC602)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-oligomer

Ligands

1 x M37: 1-[2-(AMINOMETHYL)PHENYL]-N-(3-FLUORO-2'-SULFAMOYLBIPHENYL-4-YL)-3-(TRIFLUOROMETHYL)-1H-PYRAZOLE-5-CARBOXAMIDE(Non-covalent)

M37.1: 18 residues within 4Å: Chain A: K.82, E.83, T.84, Y.85, R.132, E.135, F.162, D.179, A.180, C.181, Q.182, S.185, V.203, S.204, W.205, G.206, G.208, C.209 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:Y.85, A:F.162, A:F.162, A:A.180, A:V.203, A:W.205, A:W.205 Hydrogen bonds: A:K.82, A:A.180, A:Q.182, A:G.206 Water bridges: A:A.180, A:G.206, A:E.207, A:G.208 pi-Stacking: A:Y.85, A:Y.85, A:F.162, A:W.205, A:W.205 Halogen bonds: A:C.181

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: D.56, N.58, Q.61, E.63, E.66 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.56, A:N.58, A:Q.61, A:E.66

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pruitt, J.R. et al., Discovery of 1-(2-Aminomethylphenyl)-3-trifluoromethyl-N-[3-fluoro-2'-(aminosulfonyl)[1,1'-biphenyl)]-1H-pyrazole-5-carboxyamide (DPC602), a Potent, Selective, and Orally Bioavailable Factor Xa Inhibitor. J.Med.Chem. (2003)

Release Date

2010-04-21

Peptides

Coagulation factor X: A
Coagulation factor X: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
L

Coagulation factor X

Coagulation factor X

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