SMTL ID : 3ng1.2 (1 other biounit)

N AND GTPASE DOMAINS OF THE SIGNAL SEQUENCE RECOGNITION PROTEIN FFH FROM THERMUS AQUATICUS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

3 x CD: CADMIUM ION(Non-covalent)

CD.1: 2 residues within 4Å: Chain A: E.11, E.33 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.11, A:E.11, A:E.33, A:E.33 CD.2: 1 residues within 4Å: Chain A: E.285 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.285, A:E.285 CD.3: 1 residues within 4Å: Chain A: H.261 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.261

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 7 residues within 4Å: Chain A: G.108, S.109, G.110, K.111, T.112, T.113, Q.144 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.108, A:G.110, A:K.111, A:T.112, A:T.113, A:T.113, A:Q.144

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 10 residues within 4Å: Chain A: G.105, L.106, A.189, G.190, R.191, Q.193, I.194, D.195, L.198, M.199 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.105, A:Q.107, A:R.191, A:D.195, A:D.195 EDO.6: 9 residues within 4Å: Chain A: A.133, A.134, D.135, A.141, R.142, L.145, D.187, T.188, A.189 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.135, A:T.188

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Freymann, D.M. et al., Functional changes in the structure of the SRP GTPase on binding GDP and Mg2+GDP. Nat.Struct.Biol. (1999)

Release Date

1999-07-30

Peptides

SIGNAL SEQUENCE RECOGNITION PROTEIN FFH: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

SIGNAL SEQUENCE RECOGNITION PROTEIN FFH

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