SMTL ID : 3ocl.1

Crystal structure of penicillin-binding protein 3 from Pseudomonas aeruginosa in complex with carbenicillin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: R.372, V.373, G.374 Ligand excluded by PLIP

1 x CB9: (2R,4S)-2-[(1R)-1-{[(2S)-2-carboxy-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid(Covalent)

CB9.2: 12 residues within 4Å: Chain A: S.279, V.318, S.334, N.336, Y.394, K.469, S.470, G.471, T.472, Y.488, Y.517, G.519 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:V.318, A:T.472, A:Y.488, A:Y.517 Hydrogen bonds: A:S.279, A:S.334, A:S.334, A:S.334, A:N.336, A:Y.394, A:T.472, A:T.472, A:T.472, A:G.519 Water bridges: A:S.470, A:S.470, A:G.520 Salt bridges: A:K.469

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 8 residues within 4Å: Chain A: G.232, S.233, R.269, D.273, F.275, R.489, V.508, D.510 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.232, A:S.233, A:R.269, A:R.269, A:R.489

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sainsbury, S. et al., Crystal structures of penicillin-binding protein 3 from Pseudomonas aeruginosa: comparison of native and antibiotic-bound forms. J.Mol.Biol. (2011)

Release Date

2010-11-10

Peptides

Penicillin-binding protein 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Penicillin-binding protein 3

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