SMTL ID : 3p79.1

P38 inhibitor-bound

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 14 residues within 4Å: Chain A: E.198, L.201, W.203, H.205, Y.206, N.207, P.248, L.252, K.255, I.265, L.297, D.298, S.299, D.300 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:E.198, A:L.201, A:W.203, A:W.203, A:W.203, A:L.252, A:I.265 Hydrogen bonds: A:Y.206, A:N.207, A:D.298, A:D.298, A:S.299 Water bridges: A:S.299, A:S.299

1 x P79: 1-{3-tert-butyl-1-[2-(1,1-dioxidothiomorpholin-4-yl)-2-oxoethyl]-1H-pyrazol-5-yl}-3-naphthalen-2-ylurea(Non-covalent)

P79.2: 17 residues within 4Å: Chain A: A.57, K.59, R.73, R.76, E.77, L.80, L.81, M.84, V.89, I.90, L.110, T.112, H.154, I.172, L.173, D.174, F.175 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:A.57, A:K.59, A:K.59, A:L.81, A:L.81, A:V.89, A:I.90, A:I.90, A:L.110, A:T.112, A:I.172, A:F.175 Hydrogen bonds: A:E.77, A:E.77, A:D.174 Water bridges: A:D.174

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moffett, K. et al., Discovery of a novel class of non-ATP site DFG-out state p38 inhibitors utilizing computationally assisted virtual fragment-based drug design (vFBDD). Bioorg.Med.Chem.Lett. (2011)

Release Date

2011-10-12

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

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