SMTL ID : 3p7a.1

p38 inhibitor-bound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.31 Å

Oligo State

monomer

Ligands

1 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 15 residues within 4Å: Chain A: P.197, E.198, L.201, W.203, H.205, Y.206, L.238, L.242, L.252, K.255, I.265, L.297, D.298, S.299, D.300 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:P.197, A:L.201, A:W.203, A:L.238, A:L.242, A:L.242, A:L.252, A:I.265, A:L.297 Hydrogen bonds: A:Y.206, A:K.255, A:D.298, A:S.299

1 x P7A: 1-[5-tert-butyl-2-(1,1-dioxidothiomorpholin-4-yl)thiophen-3-yl]-3-naphthalen-1-ylurea(Non-covalent)

P7A.2: 15 residues within 4Å: Chain A: A.57, K.59, R.73, E.77, L.80, L.81, M.84, I.90, L.110, T.112, H.154, L.173, D.174, F.175, G.176 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:A.57, A:K.59, A:L.81, A:I.90, A:L.110, A:T.112, A:D.174 Hydrogen bonds: A:E.77, A:E.77, A:D.174 pi-Stacking: A:F.175

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moffett, K. et al., Discovery of a novel class of non-ATP site DFG-out state p38 inhibitors utilizing computationally assisted virtual fragment-based drug design (vFBDD). Bioorg.Med.Chem.Lett. (2011)

Release Date

2011-10-12

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

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