SMTL ID : 3p7c.1

p38 inhibitor-bound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 13 residues within 4Å: Chain A: P.197, E.198, L.201, W.203, Y.206, N.207, L.242, L.252, K.255, L.297, D.298, S.299, D.300 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:P.197, A:L.201, A:L.242 Hydrogen bonds: A:Y.206, A:K.255, A:D.298, A:D.298, A:S.299, A:S.299

1 x P7C: 1-[5-tert-butyl-3-({4-[2-(dimethylamino)ethyl]-5-oxo-1,4-diazepan-1-yl}carbonyl)thiophen-2-yl]-3-(2,3-dichlorophenyl)urea(Non-covalent)

P7C.2: 20 residues within 4Å: Chain A: A.57, K.59, R.73, R.76, E.77, L.80, L.81, M.84, V.89, I.90, L.110, T.112, I.147, I.153, H.154, R.155, I.172, L.173, D.174, F.175 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.80, A:L.80, A:V.89, A:I.90, A:I.147, A:I.172, A:D.174, A:F.175 Hydrogen bonds: A:R.76, A:E.77, A:E.77, A:D.174 Halogen bonds: A:A.57, A:L.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moffett, K. et al., Discovery of a novel class of non-ATP site DFG-out state p38 inhibitors utilizing computationally assisted virtual fragment-based drug design (vFBDD). Bioorg.Med.Chem.Lett. (2011)

Release Date

2011-10-12

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

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