SMTL ID : 3p88.3 (2 other biounits)

FXR bound to isoquinolinecarboxylic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.95 Å

Oligo State

hetero-3-3-mer

Ligands

3 x P88: 7-(4-{[3-(2,6-dimethylphenyl)-5-(1-methylethyl)isoxazol-4-yl]methoxy}phenyl)isoquinoline-3-carboxylic acid(Non-covalent)

P88.1: 19 residues within 4Å: Chain A: M.22, T.27, F.41, L.44, T.45, M.47, A.48, H.51, M.85, F.86, R.88, S.89, I.92, S.99, Y.126, H.204, W.211, F.218, W.226 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:T.27, A:F.41, A:L.44, A:L.44, A:M.47, A:M.85, A:F.86, A:I.92, A:F.218, A:W.226, A:W.226 Water bridges: A:M.22 Salt bridges: A:R.88 P88.3: 19 residues within 4Å: Chain C: M.22, T.27, F.41, L.44, T.45, M.47, A.48, H.51, M.85, F.86, R.88, S.89, I.92, S.99, Y.126, H.204, W.211, F.218, W.226 13 PLIP interactions: 13 interactions with chain C Hydrophobic interactions: C:T.27, C:F.41, C:L.44, C:L.44, C:M.47, C:M.85, C:F.86, C:I.92, C:F.218, C:W.226, C:W.226 Water bridges: C:M.22 Salt bridges: C:R.88 P88.5: 19 residues within 4Å: Chain E: M.22, T.27, F.41, L.44, T.45, M.47, A.48, H.51, M.85, F.86, R.88, S.89, I.92, S.99, Y.126, H.204, W.211, F.218, W.226 13 PLIP interactions: 13 interactions with chain E Hydrophobic interactions: E:T.27, E:F.41, E:L.44, E:L.44, E:M.47, E:M.85, E:F.86, E:I.92, E:F.218, E:W.226, E:W.226 Water bridges: E:M.22 Salt bridges: E:R.88

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: S.36, A.37, N.111 Chain C: N.28, K.32 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain C Hydrogen bonds: A:A.37, A:N.111, C:N.28 Salt bridges: C:K.32 SO4.4: 5 residues within 4Å: Chain C: S.36, A.37, N.111 Chain E: N.28, K.32 4 PLIP interactions: 2 interactions with chain C, 2 interactions with chain E Hydrogen bonds: C:A.37, C:N.111, E:N.28 Salt bridges: E:K.32 SO4.6: 5 residues within 4Å: Chain A: N.28, K.32 Chain E: S.36, A.37, N.111 4 PLIP interactions: 2 interactions with chain E, 2 interactions with chain A Hydrogen bonds: E:A.37, E:N.111, A:N.28 Salt bridges: A:K.32

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bass, J.Y. et al., Conformationally constrained farnesoid X receptor (FXR) agonists: Heteroaryl replacements of the naphthalene. Bioorg.Med.Chem.Lett. (2011)

Release Date

2011-08-31

Peptides

Farnesoid X receptor: ACE
Nuclear receptor coactivator 1: BDF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

E
A

B
B

D
B

F
B

Farnesoid X receptor

Nuclear receptor coactivator 1

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