SMTL ID : 6a5x.1

FXR-LBD with HNC180 and SRC1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: S.36, A.37, N.111 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.37, A:N.111 SO4.2: 2 residues within 4Å: Chain A: Q.173, F.187 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.173, A:Q.173 Salt bridges: A:K.177 SO4.3: 3 residues within 4Å: Chain A: P.23, Q.24, E.25 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.24 SO4.4: 4 residues within 4Å: Chain A: K.95, M.134, T.135, Q.136 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.136 Salt bridges: A:K.95 SO4.6: 2 residues within 4Å: Chain B: Y.7, K.11 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Y.7 Salt bridges: B:K.11

1 x 9R3: 2-[(1R,5S)-9-[[3-[2,6-bis(chloranyl)phenyl]-5-cyclopropyl-1,2-oxazol-4-yl]methoxy]-3-azabicyclo[3.3.1]nonan-3-yl]-1,3-benzothiazole-6-carboxylic acid(Non-covalent)

9R3.5: 24 residues within 4Å: Chain A: R.21, M.22, T.27, I.30, F.41, L.44, T.45, M.47, A.48, H.51, M.85, F.86, R.88, S.89, I.92, S.99, G.100, I.114, M.122, Y.126, H.204, W.211, F.218, W.226 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:T.27, A:I.30, A:F.41, A:L.44, A:F.86, A:F.86, A:I.92, A:W.211, A:F.218, A:W.226 Hydrogen bonds: A:M.22 Salt bridges: A:R.21, A:R.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, N. et al., Ligand binding and heterodimerization with retinoid X receptor alpha (RXR alpha ) induce farnesoid X receptor (FXR) conformational changes affecting coactivator binding. J. Biol. Chem. (2018)

Release Date

2018-10-10

Peptides

Bile acid receptor: A
Nuclear receptor coactivator 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Bile acid receptor

Nuclear receptor coactivator 1

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