SMTL ID : 3pxq.1

CDK2 in complex with 3 molecules of 8-anilino-1-naphthalene sulfonate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: L.74, L.75, D.76 No protein-ligand interaction detected (PLIP)

3 x 2AN: 8-ANILINO-1-NAPHTHALENE SULFONATE(Non-covalent)

2AN.2: 16 residues within 4Å: Chain A: I.18, G.19, E.20, G.21, V.26, A.39, K.41, V.72, F.88, L.91, D.94, Q.139, L.142, A.152, D.153 Ligands: 2AN.4 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:I.18, A:V.26, A:A.39, A:V.72, A:F.88, A:F.88, A:D.94, A:Q.139, A:L.142, A:L.142, A:A.152 Hydrogen bonds: A:D.153, A:D.153 Water bridges: A:T.22 Salt bridges: A:K.41 2AN.3: 8 residues within 4Å: Chain A: I.60, K.64, V.77, H.79, L.84, L.86, F.160 Ligands: 2AN.4 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.60, A:I.60, A:L.84, A:L.86, A:F.160 Salt bridges: A:K.64, A:H.79 pi-Stacking: A:H.79 2AN.4: 15 residues within 4Å: Chain A: K.41, I.43, L.63, K.64, V.72, L.74, L.86, F.88, A.152, D.153, F.154, L.156, F.160 Ligands: 2AN.2, 2AN.3 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:I.43, A:L.63, A:K.64, A:V.72, A:L.74, A:L.86, A:L.156, A:F.160, A:F.160 Hydrogen bonds: A:D.153, A:F.154 Water bridges: A:D.153, A:D.153 Salt bridges: A:K.41 pi-Stacking: A:F.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Betzi, S. et al., Discovery of a Potential Allosteric Ligand Binding Site in CDK2. Acs Chem.Biol. (2011)

Release Date

2011-02-16

Peptides

Cell division protein kinase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cell division protein kinase 2

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