SMTL ID : 3r71.1

CDK2 in complex with inhibitor KVR-1-162

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: E.265, R.268, S.269 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.268 Water bridges: A:R.268

1 x X86: 4-[(3-methoxypropyl)amino]-5-nitro-2-[(pyridin-3-ylmethyl)amino]benzamide(Non-covalent)

X86.2: 15 residues within 4Å: Chain A: I.18, G.19, E.20, G.21, V.26, A.39, K.41, E.89, F.90, L.91, H.92, Q.93, D.94, Q.139, L.142 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.18, A:L.142, A:L.142 Hydrogen bonds: A:E.89, A:L.91, A:L.91 Water bridges: A:K.41, A:Q.139, A:D.153

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schonbrunn, E. et al., Structure-guided optimization of novel CDK2 inhibitors discovered by high-throughput screening. To be Published

Release Date

2012-08-08

Peptides

Cyclin-dependent kinase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cyclin-dependent kinase 2

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