SMTL ID : 3r73.1

CDK2 in complex with inhibitor KVR-1-164

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 4 residues within 4Å: Chain A: F.256, E.265, R.268, S.269 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.268 Water bridges: A:F.256, A:E.265, A:S.269

1 x X87: 4-[(3-aminopropyl)amino]-5-nitro-2-[(pyridin-3-ylmethyl)amino]benzamide(Non-covalent)

X87.2: 12 residues within 4Å: Chain A: I.18, V.26, A.39, K.41, E.89, F.90, L.91, H.92, Q.93, D.94, Q.139, L.142 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.18, A:F.90, A:L.142, A:L.142 Hydrogen bonds: A:E.89, A:L.91, A:L.91, A:Q.139 Water bridges: A:Q.139

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schonbrunn, E. et al., Structure-guided optimization of novel CDK2 inhibitors discovered by high-throughput screening. To be Published

Release Date

2012-08-08

Peptides

Cyclin-dependent kinase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cyclin-dependent kinase 2

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