SMTL ID : 3rm6.1

CDK2 in complex with inhibitor KVR-2-80

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: E.265, R.268, S.269 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.268 Water bridges: A:E.265, A:R.268, A:S.269

1 x 18Z: 2-{[(2-aminopyrimidin-5-yl)methyl]amino}-5-nitro-4-{[2-(piperazin-1-yl)ethyl]amino}benzamide(Non-covalent)

18Z.2: 14 residues within 4Å: Chain A: I.18, T.22, V.26, A.39, E.89, F.90, L.91, H.92, D.94, K.97, K.137, Q.139, N.140, L.142 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.18, A:A.39, A:L.142 Hydrogen bonds: A:E.89, A:L.91, A:L.91, A:K.97, A:N.140 Water bridges: A:E.16, A:I.18

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schonbrunn, E. et al., Structure-guided optimization of novel CDK2 inhibitors discovered by high-throughput screening. To be Published

Release Date

2012-08-08

Peptides

Cyclin-dependent kinase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cyclin-dependent kinase 2

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