- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.85 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x FE2: FE (II) ION(Non-covalent)
- 4 x NO: NITRIC OXIDE(Non-covalent)
NO.2: 6 residues within 4Å:- Chain A: H.138, E.142, H.180, N.197
- Ligands: FE2.1, S0H.3
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:E.142, A:N.197
NO.6: 7 residues within 4Å:- Chain A: K.23
- Chain B: H.138, E.142, H.180, N.197
- Ligands: FE2.5, S0H.7
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:E.142, B:N.197, A:K.23
NO.9: 6 residues within 4Å:- Chain C: H.138, E.142, H.180, N.197
- Ligands: FE2.8, S0H.10
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:E.142, C:N.197
NO.13: 7 residues within 4Å:- Chain C: K.23
- Chain D: H.138, E.142, H.180, N.197
- Ligands: FE2.12, S0H.14
3 PLIP interactions:2 interactions with chain D, 1 interactions with chain C- Hydrogen bonds: D:E.142, D:N.197, C:K.23
- 4 x S0H: (S)-2-HYDROXYPROPYLPHOSPHONIC ACID(Non-covalent)
S0H.3: 11 residues within 4Å:- Chain A: R.97, Y.103, Y.105, N.135, H.138, E.142, H.180, F.182
- Chain B: K.23
- Ligands: FE2.1, NO.2
8 PLIP interactions:7 interactions with chain A, 1 interactions with chain B- Hydrophobic interactions: A:F.182
- Hydrogen bonds: A:R.97, A:Y.103, A:Y.103, A:Y.105, A:Y.105, A:N.135, B:K.23
S0H.7: 12 residues within 4Å:- Chain A: K.23
- Chain B: R.97, Y.103, Y.105, N.135, H.138, E.142, L.144, H.180, F.182
- Ligands: FE2.5, NO.6
6 PLIP interactions:5 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:F.182
- Hydrogen bonds: B:R.97, B:Y.105, B:N.135, A:K.23
- Water bridges: B:Y.103
S0H.10: 11 residues within 4Å:- Chain C: R.97, Y.103, Y.105, N.135, H.138, E.142, H.180, F.182
- Chain D: K.23
- Ligands: FE2.8, NO.9
8 PLIP interactions:1 interactions with chain D, 7 interactions with chain C- Hydrogen bonds: D:K.23, C:R.97, C:Y.103, C:Y.103, C:Y.105, C:Y.105, C:N.135
- Hydrophobic interactions: C:F.182
S0H.14: 12 residues within 4Å:- Chain C: K.23
- Chain D: R.97, Y.103, Y.105, N.135, H.138, E.142, L.144, H.180, F.182
- Ligands: FE2.12, NO.13
6 PLIP interactions:5 interactions with chain D, 1 interactions with chain C- Hydrophobic interactions: D:F.182
- Hydrogen bonds: D:R.97, D:Y.105, D:N.135, C:K.23
- Water bridges: D:Y.103
- 2 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yun, D. et al., Structural basis of regiospecificity of a mononuclear iron enzyme in antibiotic fosfomycin biosynthesis. J.Am.Chem.Soc. (2011)
- Release Date
- 2011-07-06
- Peptides
- Epoxidase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.85 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x FE2: FE (II) ION(Non-covalent)
- 4 x NO: NITRIC OXIDE(Non-covalent)
- 4 x S0H: (S)-2-HYDROXYPROPYLPHOSPHONIC ACID(Non-covalent)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yun, D. et al., Structural basis of regiospecificity of a mononuclear iron enzyme in antibiotic fosfomycin biosynthesis. J.Am.Chem.Soc. (2011)
- Release Date
- 2011-07-06
- Peptides
- Epoxidase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B