3sn8.1 | SWISS-MODEL Template Library

SMTL ID : 3sn8.1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

homo-dimer

Ligands

2 x S89: N-[(2S)-1-HYDROXY-3-PHENYLPROPAN-2-YL]-NALPHA-[(2E)-3-PHENYLPROP-2-ENOYL]-L-PHENYLALANINAMIDE(Covalent)

S89.1:	15 residues within 4Å: Chain A: H.41, M.49, F.140, L.141, N.142, G.143, S.144, C.145, H.163, H.164, M.165, E.166, D.187, R.188, Q.189 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.140, A:N.142, A:M.165, A:E.166 Hydrogen bonds: A:N.142, A:G.143, A:C.145, A:H.164, A:E.166
S89.2:	15 residues within 4Å: Chain B: H.41, M.49, F.140, L.141, N.142, G.143, S.144, C.145, H.163, H.164, M.165, E.166, D.187, R.188, Q.189 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:F.140, B:N.142, B:M.165, B:E.166 Hydrogen bonds: B:N.142, B:G.143, B:C.145, B:H.164, B:E.166

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Zhu, L. et al., Peptide aldehyde inhibitors challenge the substrate specificity of the SARS-coronavirus main protease. Antiviral Res. (2011)

Release Date

2011-09-07

Peptides

3C-like proteinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A