SMTL ID : 3tc5.1

Selective targeting of disease-relevant protein binding domains by O-phosphorylated natural product derivatives

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x 3T5: (11alpha,16alpha)-9-fluoro-11,17-dihydroxy-16-methyl-3,20-dioxopregna-1,4-dien-21-yl dihydrogen phosphate(Non-covalent)

3T5.1: 13 residues within 4Å: Chain A: H.62, L.64, K.66, R.71, R.72, L.125, F.128, Q.132, M.133, Q.134, F.137, S.157, H.160 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.125, A:F.128, A:Q.132, A:M.133 Hydrogen bonds: A:R.71, A:S.157 Water bridges: A:K.66, A:K.66, A:S.74, A:D.115, A:Q.134 Salt bridges: A:K.66, A:R.71, A:R.72

1 x P6G: HEXAETHYLENE GLYCOL(Non-functional Binders)

P6G.2: 10 residues within 4Å: Chain A: Y.26, N.33, A.34, S.35, Q.36, W.37, I.96, K.100, S.150, G.151 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.35, A:K.100 Water bridges: A:S.35, A:S.35, A:M.149

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Graber, M. et al., Selective targeting of disease-relevant protein binding domains by o-phosphorylated natural product derivatives. Acs Chem.Biol. (2011)

Release Date

2011-08-31

Peptides

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1