SMTL ID : 8vjd.1 (1 other biounit)

Human R14A Pin1 covalently bound to inhibitor 158F10 in P21 21 21 space group

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.57 Å

Oligo State

monomer

Ligands

1 x ACE- PHE- YCP- 01- NH2: Inhibitor 158F10(Non-covalent)

ACE-PHE-YCP-01-NH2.1: 11 residues within 4Å: Chain A: H.62, C.116, S.118, L.125, Q.132, M.133, Q.134, F.137, T.155, S.157, H.160 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.125, A:F.137, A:F.137 Hydrogen bonds: A:S.118, A:Q.134, A:S.157 Water bridges: A:R.71, A:S.118

1 x P33: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL(Non-covalent)

P33.2: 11 residues within 4Å: Chain A: Y.26, A.34, S.35, Q.36, W.37, I.96, K.100, M.149, S.150, G.151 Ligands: SO4.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.35, A:S.35, A:K.100

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: S.19, R.20, S.21 Ligands: P33.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.20, A:S.21 Salt bridges: A:R.20 SO4.4: 3 residues within 4Å: Chain A: P.55, R.145, R.164 4 PLIP interactions: 4 interactions with chain A Water bridges: A:L.144, A:T.146, A:R.164 Salt bridges: A:R.164 SO4.5: 3 residues within 4Å: Chain A: Q.78, T.82, R.83 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Q.78, A:Q.78, A:T.82 Water bridges: A:R.83, A:R.83, A:R.83 Salt bridges: A:R.83 SO4.6: 1 residues within 4Å: Chain A: R.57 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.57, A:R.57 Salt bridges: A:R.57 SO4.7: 3 residues within 4Å: Chain A: Q.134, K.135, P.136 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.134, A:K.135 SO4.8: 3 residues within 4Å: Chain A: K.120, A.121, R.122 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.121, A:R.122 Salt bridges: A:R.122

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Alboreggia, G. et al., Targeted Degradation of Pin1 by Protein Destabilizing Compounds. To Be Published

Release Date

2024-11-06

Peptides

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1

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