SMTL ID : 3uwe.1

AKR1C3 complexed with 3-phenoxybenzoic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.68 Å

Oligo State

monomer

Ligands

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 30 residues within 4Å: Chain A: G.22, T.23, Y.24, D.50, Y.55, K.84, H.117, S.166, N.167, Q.190, Y.216, S.217, A.218, L.219, G.220, S.221, Q.222, L.236, A.253, L.268, A.269, K.270, S.271, Y.272, N.273, R.276, Q.279, N.280, F.306 Ligands: VJJ.2 29 PLIP interactions: 29 interactions with chain A Hydrophobic interactions: A:Y.216, A:Y.216, A:Y.216, A:F.306 Hydrogen bonds: A:T.23, A:Y.24, A:D.50, A:Y.55, A:S.166, A:N.167, A:Q.190, A:S.217, A:L.219, A:G.220, A:S.221, A:Q.222, A:Q.222, A:Q.222, A:K.270, A:Y.272, A:Q.279, A:N.280 Water bridges: A:S.217, A:A.218, A:A.218, A:Q.279 Salt bridges: A:K.270, A:R.276 pi-Cation interactions: A:R.276

1 x VJJ: 3-phenoxybenzoic acid(Non-covalent)

VJJ.2: 14 residues within 4Å: Chain A: Y.24, L.54, Y.55, W.86, H.117, S.118, M.120, N.167, Y.216, W.227, F.306, F.311 Ligands: NAP.1, EDO.3 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.54, A:W.86, A:F.306, A:F.306, A:F.311, A:F.311 Salt bridges: A:K.84, A:H.117 pi-Stacking: A:Y.24, A:W.227

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 5 residues within 4Å: Chain A: L.54, W.86, F.311 Ligands: VJJ.2, EDO.5 No protein-ligand interaction detected (PLIP) EDO.4: 9 residues within 4Å: Chain A: Q.6, P.17, V.18, L.19, G.45, F.46, R.47, H.48, F.284 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.6, A:V.18, A:L.19, A:R.47, A:H.48 EDO.5: 4 residues within 4Å: Chain A: Y.24, L.54, R.226 Ligands: EDO.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.24, A:R.226, A:R.226 EDO.6: 7 residues within 4Å: Chain A: F.15, P.17, E.77, D.78, I.79, F.80, D.112 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.79 Water bridges: A:F.15, A:R.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jackson, V.J. et al., Structure of AKR1C3 with 3-phenoxybenzoic acid bound. Acta Crystallogr.,Sect.F (2012)

Release Date

2012-04-04

Peptides

Aldo-keto reductase family 1 member C3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Aldo-keto reductase family 1 member C3

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