SMTL ID : 4fam.2 (1 other biounit)

Crystal structure of human 17beta-hydroxysteroid dehydrogenase type 5 in complex with 3-((3,4-dihydroisoquinolin-2(1H)-yl)sulfonyl)benzoic acid (17)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 29 residues within 4Å: Chain A: G.22, T.23, Y.24, D.50, Y.55, H.117, S.166, N.167, Q.190, Y.216, S.217, A.218, L.219, G.220, S.221, Q.222, L.236, A.253, L.268, A.269, K.270, S.271, Y.272, N.273, R.276, Q.279, N.280, F.306 Ligands: 0SZ.2 31 PLIP interactions: 31 interactions with chain A Hydrophobic interactions: A:Y.216, A:Y.216, A:Y.216, A:F.306 Hydrogen bonds: A:T.23, A:Y.24, A:D.50, A:D.50, A:Y.55, A:S.166, A:N.167, A:Q.190, A:S.217, A:L.219, A:S.221, A:Q.222, A:Q.222, A:K.270, A:S.271, A:Y.272, A:Q.279, A:N.280 Water bridges: A:S.217, A:A.218, A:A.218, A:R.276, A:R.276, A:Q.279 Salt bridges: A:K.270, A:R.276 pi-Cation interactions: A:R.276

1 x 0SZ: 3-(3,4-dihydroisoquinolin-2(1H)-ylsulfonyl)benzoic acid(Non-covalent)

0SZ.2: 15 residues within 4Å: Chain A: Y.24, L.54, Y.55, W.86, H.117, N.167, Y.216, W.227, F.306, N.307, S.308, F.311, Y.319 Ligands: NAP.1, EDO.3 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.54, A:W.227, A:W.227, A:F.306, A:F.311, A:Y.319 Salt bridges: A:K.84, A:H.117 pi-Stacking: A:F.306

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 6 residues within 4Å: Chain A: W.86, S.87, S.118, M.120, F.311 Ligands: 0SZ.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.87, A:S.118, A:M.120, A:M.120 EDO.4: 1 residues within 4Å: Chain A: Y.319 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Y.319 EDO.5: 4 residues within 4Å: Chain A: A.44, R.278, Q.282, E.285 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.285

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jamieson, S.M. et al., 3-(3,4-Dihydroisoquinolin-2(1H)-ylsulfonyl)benzoic acids; a New Class of Highly Potent and Selective Inhibitors of the Type 5 17-beta-hydroxysteroid Dehydrogenase AKR1C3. J.Med.Chem. (2012)

Release Date

2012-10-10

Peptides

Aldo-keto reductase family 1 member C3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Aldo-keto reductase family 1 member C3

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