- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.51 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CU: COPPER (II) ION(Non-covalent)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x NA: SODIUM ION(Non-functional Binders)
NA.3: 6 residues within 4Å:- Chain A: R.41, D.432, M.433, F.438, D.573, I.574
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:R.41, A:M.433, A:D.573, A:I.574
NA.13: 6 residues within 4Å:- Chain B: R.41, D.432, M.433, F.438, D.573, I.574
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:R.41, B:I.574, B:I.574
- 2 x K: POTASSIUM ION(Non-covalent)
K.4: 4 residues within 4Å:- Chain A: A.85, A.86, R.140, S.554
3 PLIP interactions:2 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:A.85, A:S.554, H2O.13
K.14: 3 residues within 4Å:- Chain B: V.71, T.72, G.74
3 PLIP interactions:2 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:V.71, B:T.72, H2O.35
- 13 x GOL: GLYCEROL(Non-functional Binders)
GOL.5: 6 residues within 4Å:- Chain A: T.513, L.514, L.515, T.530
- Chain B: R.449, R.482
9 PLIP interactions:4 interactions with chain B, 5 interactions with chain A- Water bridges: B:R.449, B:R.449, B:R.482, B:R.482
- Hydrogen bonds: A:T.513, A:T.513, A:T.513, A:K.531, A:K.531
GOL.6: 5 residues within 4Å:- Chain A: L.582, D.597
- Chain B: H.507, K.602, R.604
8 PLIP interactions:2 interactions with chain B, 6 interactions with chain A- Hydrogen bonds: B:K.602, A:D.597
- Water bridges: B:R.604, A:Q.511, A:D.597, A:D.597, A:T.598, A:T.598
GOL.7: 8 residues within 4Å:- Chain A: E.339, W.341, R.362, E.391, K.393
- Chain B: W.341, G.342
- Ligands: GOL.10
7 PLIP interactions:5 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:E.339, A:R.362, A:Y.381, A:E.391, A:K.393
- Water bridges: B:D.340, B:D.340
GOL.8: 5 residues within 4Å:- Chain A: N.360, Y.383, D.385, E.389, K.602
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:N.360, A:D.385, A:K.602, A:K.602
- Water bridges: A:W.341
GOL.9: 10 residues within 4Å:- Chain A: I.31, A.32, Y.33, L.34, L.93, V.243, Q.298, S.321, D.322, A.323
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:L.34, A:D.322
- Water bridges: A:Q.298
GOL.10: 7 residues within 4Å:- Chain A: W.341, R.362, Y.381, E.389, E.391
- Chain B: W.341
- Ligands: GOL.7
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:R.362, A:R.362, A:Y.381
- Water bridges: A:E.389
GOL.15: 11 residues within 4Å:- Chain B: R.524, R.525, P.545, T.546, F.549, V.550, H.553, S.554, G.555, G.556, A.557
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:R.524, B:F.549, B:A.557, B:A.557
GOL.16: 4 residues within 4Å:- Chain A: R.449
- Chain B: T.513, L.514, T.530
9 PLIP interactions:4 interactions with chain A, 5 interactions with chain B- Water bridges: A:R.449, A:R.482, A:R.482, A:R.482, B:T.513, B:K.531, B:K.531, B:K.531
- Hydrogen bonds: B:T.530
GOL.17: 5 residues within 4Å:- Chain A: D.340, W.341
- Chain B: E.339, R.362, K.393
8 PLIP interactions:5 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:R.362, B:K.393, B:K.393
- Water bridges: B:E.339, B:Y.381, A:D.340, A:D.340, A:R.359
GOL.18: 6 residues within 4Å:- Chain A: P.128, W.160, G.372
- Chain B: D.349, L.350, W.351
5 PLIP interactions:4 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:D.349, B:L.350, B:W.351
- Water bridges: B:S.348, A:G.372
GOL.19: 6 residues within 4Å:- Chain A: H.507, K.602, R.604
- Chain B: L.582, D.597, T.598
11 PLIP interactions:9 interactions with chain B, 2 interactions with chain A- Water bridges: B:H.509, B:Q.511, B:D.597, B:D.597, B:D.597, B:D.597, B:T.598, B:T.598, B:T.598
- Hydrogen bonds: A:K.602, A:K.602
GOL.20: 6 residues within 4Å:- Chain B: V.151, D.153, H.162, V.189, P.190, A.191
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:D.153, B:A.191
GOL.21: 6 residues within 4Å:- Chain A: L.350, W.351
- Chain B: A.127, P.128, W.160, G.372
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain B- Water bridges: A:L.350, A:L.350, A:W.351, B:G.372, B:G.372
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Murakawa, T. et al., Probing the Catalytic Mechanism of Copper Amine Oxidase from Arthrobacter globiformis with Halide Ions. J.Biol.Chem. (2015)
- Release Date
- 2015-08-19
- Peptides
- Phenylethylamine oxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
SMTL ID : 3x3z.1
Copper amine oxidase from Arthrobacter globiformis: Aminoresorcinol form produced by anaerobic reduction with ethylamine hydrochloride
Phenylethylamine oxidase
Toggle Identical (AB)Related Entries With Identical Sequence
3x3x.1 | 3x3x.2 | 3x3y.1 | 3x40.1 | 3x40.2 | 3x41.1 | 5zou.1 | 5zow.1 | 5zox.1 | 5zox.2 | 5zoy.1 | 5zoy.2 | 5zoz.1 | 5zoz.2 | 5zp0.1 | 5zp0.2 | 5zp1.1 | 5zp1.2 | 5zp2.1 | 5zp2.2 | 5zp3.1 | 5zp3.2 | 5zp4.1 | 5zp4.2 | 5zp5.1 | 5zp5.2 | 5zp6.1 | 5zp6.2 | 5zp7.1 | 5zp8.1 more...less...5zp9.1 | 5zpa.1 | 5zpb.1 | 5zpc.1 | 5zpd.1 | 5zpe.1 | 5zpf.1 | 5zpg.1 | 5zph.1 | 5zpi.1 | 5zpj.1 | 5zpj.2 | 5zpk.1 | 5zpk.2 | 5zpl.1 | 5zpl.2 | 5zpm.1 | 5zpm.2 | 5zpn.1 | 5zpn.2 | 5zpo.1 | 5zpo.2 | 5zpp.1 | 5zpp.2 | 5zpq.1 | 5zpq.2 | 5zpr.1 | 5zpr.2 | 5zps.1 | 5zps.2 | 5zpt.1 | 5zpt.2 | 7ynh.1 | 7ynh.2