SMTL ID : 4a4q.1

Stereoselective Synthesis, X-ray Analysis, and Biological Evaluation of a New Class of Lactam Based HIV-1 Protease Inhibitors

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

1 x UX9: methyl [(2S)-1-{2-(2-{(3R,4S)-3-benzyl-4-hydroxy-1-[(1S,2R)-2-hydroxy-2,3-dihydro-1H-inden-1-yl]-2-oxopyrrolidin-3-yl}ethyl)-2-[4-(pyridin-4-yl)benzyl]hydrazinyl}-3,3-dimethyl-1-oxobutan-2-yl]carbamate(Non-covalent)

UX9.1: 25 residues within 4Å: Chain A: R.8, D.25, G.27, A.28, D.30, V.32, I.47, G.48, G.49, I.50, P.81, T.82, V.84 Chain B: L.23, D.25, G.27, A.28, D.29, I.47, G.48, G.49, I.50, F.53, P.81, T.82 23 PLIP interactions: 12 interactions with chain B, 11 interactions with chain A Hydrophobic interactions: B:L.23, B:I.47, B:I.50, B:P.81, B:T.82, A:A.28, A:D.30, A:V.32, A:I.47, A:P.81, A:P.81, A:T.82, A:V.84 Hydrogen bonds: B:D.25, B:G.27, B:D.29, B:G.48, A:G.27, A:I.50 Water bridges: B:I.50, B:I.50 Salt bridges: B:D.25, A:D.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, X. et al., Synthesis, X-Ray Analysis, and Biological Evaluation of a New Class of Stereopure Lactam-Based HIV-1 Protease Inhibitors. J.Med.Chem. (2012)

Release Date

2012-11-07

Peptides

PROTEASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PROTEASE

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