SMTL ID : 4fdn.1

Mycobacterium tuberculosis DprE1 in complex with CT325 - hexagonal crystal form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 33 residues within 4Å: Chain A: W.36, I.72, A.73, R.74, G.75, L.76, G.77, R.78, S.79, Y.80, N.83, A.84, M.94, A.114, P.136, G.137, T.138, V.141, T.142, G.144, G.145, A.148, C.149, I.151, H.152, N.198, G.199, G.202, I.203, I.204, Y.435, A.437 Ligands: 0T4.2 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:W.36, A:R.78, A:Y.80, A:T.138 Hydrogen bonds: A:A.73, A:G.75, A:L.76, A:G.77, A:R.78, A:S.79, A:N.83, A:G.137, A:T.142, A:G.145, A:H.152, A:H.152, A:N.198, A:I.204, A:I.204 Water bridges: A:G.77, A:S.79, A:G.144, A:G.144, A:Q.356, A:K.438 pi-Cation interactions: A:K.438

1 x 0T4: 3-(hydroxyamino)-N-[(1R)-1-phenylethyl]-5-(trifluoromethyl)benzamide(Covalent)

0T4.2: 14 residues within 4Å: Chain A: Y.80, G.137, H.152, G.153, K.154, S.248, W.250, Q.356, V.385, K.387, N.405, I.406, C.407 Ligands: FAD.1 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:W.250, A:V.385, A:V.385 Hydrogen bonds: A:N.405, A:C.407 Halogen bonds: A:H.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Batt, S.M. et al., Structural basis of inhibition of Mycobacterium tuberculosis DprE1 by benzothiazinone inhibitors. Proc.Natl.Acad.Sci.USA (2012)

Release Date

2012-07-04

Peptides

oxidoreductase DprE1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

oxidoreductase DprE1

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