SMTL ID : 4h3a.1

Structure of E. coli undecaprenyl diphosphate synthase in complex with BPH-1330

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

homo-dimer

Ligands

2 x 0YY: (2Z)-2-hydroxy-4-[4-(octyloxy)phenyl]-4-oxobut-2-enoic acid(Non-covalent)(Covalent)

0YY.1: 10 residues within 4Å: Chain A: A.47, V.50, R.51, V.54, S.55, L.93, E.96, S.99, L.100, H.103 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:R.51, A:V.54, A:L.93, A:E.96 0YY.2: 10 residues within 4Å: Chain B: A.47, V.50, R.51, V.54, S.55, E.96, S.99, L.100, R.102, H.103 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:A.47, B:R.51, B:V.54, B:E.96 Salt bridges: B:R.102, B:H.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, W. et al., Antibacterial drug leads targeting isoprenoid biosynthesis. Proc.Natl.Acad.Sci.USA (2013)

Release Date

2012-12-19

Peptides

Undecaprenyl pyrophosphate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Undecaprenyl pyrophosphate synthase

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