SMTL ID : 4ie0.1

Crystal structure of the human fat mass and obesity associated protein (FTO) in complex with pyridine-2,4-dicarboxylate (2,4-PDCA)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.53 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.221, D.223, H.297 Ligands: PD2.3 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.221, A:D.223, A:H.297

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 9 residues within 4Å: Chain A: R.86, Y.96, Y.98, H.221, H.222, D.223, E.224, R.312 Ligands: PD2.3 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.86, A:Y.96, A:H.222, A:E.224, A:R.312

1 x PD2: PYRIDINE-2,4-DICARBOXYLIC ACID(Non-covalent)

PD2.3: 15 residues within 4Å: Chain A: R.86, N.195, H.221, D.223, V.234, Y.285, M.287, H.297, V.299, R.306, S.308, T.310, R.312 Ligands: ZN.1, GOL.2 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.299, A:T.310 Hydrogen bonds: A:N.195, A:N.195, A:Y.285, A:S.308 Salt bridges: A:R.86, A:H.221, A:R.306, A:R.312

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Aik, W.S. et al., Structural basis for inhibition of the fat mass and obesity associated protein (FTO). J.Med.Chem. (2013)

Release Date

2013-04-03

Peptides

Alpha-ketoglutarate-dependent dioxygenase FTO: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha-ketoglutarate-dependent dioxygenase FTO

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