- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.21 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x MN: MANGANESE (II) ION(Non-covalent)
- 3 x BEN: BENZAMIDINE(Non-functional Binders)
BEN.3: 3 residues within 4Å:- Chain A: N.60, N.61, L.62
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.60
BEN.9: 3 residues within 4Å:- Chain B: N.60, N.61, L.62
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.60
BEN.16: 3 residues within 4Å:- Chain C: N.60, N.61, L.62
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.60
- 6 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)
BME.4: 5 residues within 4Å:- Chain A: H.1, C.40, H.261, F.300
- Ligands: BME.6
No protein-ligand interaction detected (PLIP)BME.6: 5 residues within 4Å:- Chain A: L.38, G.39, C.40, F.300
- Ligands: BME.4
1 PLIP interactions:1 interactions with chain A- Water bridges: A:H.261
BME.10: 6 residues within 4Å:- Chain B: H.1, L.38, C.40, H.261, F.300
- Ligands: BME.13
No protein-ligand interaction detected (PLIP)BME.11: 5 residues within 4Å:- Chain B: H.110, C.111, P.112, D.113, P.222
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:D.113
BME.13: 7 residues within 4Å:- Chain B: H.1, V.3, L.38, G.39, C.40, F.300
- Ligands: BME.10
No protein-ligand interaction detected (PLIP)BME.18: 5 residues within 4Å:- Chain C: H.1, L.38, C.40, H.261, F.300
No protein-ligand interaction detected (PLIP)- 3 x 1EC: [(5R)-5-amino-5-carboxy-8-hydroxyoctyl](trihydroxy)borate(1-)(Non-covalent)
1EC.5: 15 residues within 4Å:- Chain A: H.97, D.120, H.122, D.124, N.126, S.132, S.133, H.137, G.138, D.179, D.228, D.230, E.273
- Ligands: MN.1, MN.2
14 PLIP interactions:14 interactions with chain A- Hydrogen bonds: A:N.126, A:S.133, A:D.179, A:D.230
- Water bridges: A:D.124, A:T.131, A:T.131, A:S.132, A:S.133, A:S.133, A:N.135, A:D.179, A:D.179, A:D.179
1EC.12: 16 residues within 4Å:- Chain B: H.97, D.120, H.122, D.124, N.126, S.132, S.133, H.137, G.138, D.179, D.228, D.230, T.242, E.273
- Ligands: MN.7, MN.8
13 PLIP interactions:13 interactions with chain B- Hydrogen bonds: B:N.126, B:S.133, B:D.179, B:T.242, B:T.242
- Water bridges: B:S.133, B:S.133, B:N.135, B:N.135, B:D.179, B:D.179, B:D.179, B:E.273
1EC.17: 16 residues within 4Å:- Chain C: H.97, D.120, H.122, D.124, N.126, S.132, S.133, H.137, G.138, D.179, D.228, D.230, T.242, E.273
- Ligands: MN.14, MN.15
14 PLIP interactions:14 interactions with chain C- Hydrogen bonds: C:H.122, C:N.126, C:S.133, C:D.179, C:T.242, C:E.273
- Water bridges: C:T.131, C:T.131, C:S.132, C:S.133, C:S.133, C:N.135, C:D.179, C:D.230
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Golebiowski, A. et al., 2-Substituted-2-amino-6-boronohexanoic acids as arginase inhibitors. Bioorg.Med.Chem.Lett. (2013)
- Release Date
- 2013-03-20
- Peptides
- Arginase-2, mitochondrial: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.21 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x MN: MANGANESE (II) ION(Non-covalent)
- 3 x BEN: BENZAMIDINE(Non-functional Binders)
- 6 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)
- 3 x 1EC: [(5R)-5-amino-5-carboxy-8-hydroxyoctyl](trihydroxy)borate(1-)(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Golebiowski, A. et al., 2-Substituted-2-amino-6-boronohexanoic acids as arginase inhibitors. Bioorg.Med.Chem.Lett. (2013)
- Release Date
- 2013-03-20
- Peptides
- Arginase-2, mitochondrial: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C