SMTL ID : 4ie9.1

Bovine PKA C-alpha in complex with 3-pyridylmethyl-5-methyl-1H-pyrazole-3-carboxylate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.92 Å

Oligo State

hetero-1-1-mer

Ligands

1 x PZX: pyridin-3-ylmethyl 5-methyl-1H-pyrazole-3-carboxylate(Non-covalent)

PZX.1: 13 residues within 4Å: Chain A: L.50, V.58, A.71, K.73, M.121, E.122, Y.123, V.124, N.172, L.174, T.184, D.185, F.328 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.50, A:V.58, A:A.71, A:L.174, A:T.184, A:F.328 Hydrogen bonds: A:K.73, A:V.124, A:D.185, A:D.185 Water bridges: A:T.184, A:F.186 Salt bridges: A:K.73

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 10 residues within 4Å: Chain A: T.52, G.53, S.54, F.55, G.56, R.57, V.58, K.73, I.74, L.75 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.54, A:F.55, A:R.57 Water bridges: A:S.54

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Skjaerven, L. et al., Accounting for Conformational Variability in Protein-Ligand Docking with NMR-Guided Rescoring. J.Am.Chem.Soc. (2013)

Release Date

2013-05-01

Peptides

cAMP-dependent protein kinase catalytic subunit alpha: A
cAMP-dependent protein kinase inhibitor alpha: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
I

cAMP-dependent protein kinase catalytic subunit alpha

cAMP-dependent protein kinase inhibitor alpha

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