SMTL ID : 4ih5.2 (1 other biounit)

Hepatitis C Virus polymerase NS5B (BK) with fragment-based compounds

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x 12R: 4-(2-phenylhydrazinyl)-1H-pyrazolo[3,4-d]pyrimidine(Non-covalent)

12R.1: 10 residues within 4Å: Chain A: R.200, C.366, L.384, G.410, N.411, M.414, Y.415, Q.446, I.447, Y.448 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.384 Hydrogen bonds: A:Y.415, A:Q.446, A:Y.448 Water bridges: A:C.366, A:R.386, A:R.386 pi-Stacking: A:Y.448

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Talamas, F.X. et al., De novo fragment design: a medicinal chemistry approach to fragment-based lead generation. J.Med.Chem. (2013)

Release Date

2013-07-03

Peptides

RNA-directed RNA polymerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

RNA-directed RNA polymerase

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