SMTL ID : 4iqr.1 (1 other biounit)

Multi-Domain Organization of the HNF4alpha Nuclear Receptor Complex on DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-2-2-mer

Ligands

2 x MYR: MYRISTIC ACID(Non-covalent)

MYR.1: 12 residues within 4Å: Chain A: V.148, S.151, M.152, Q.155, L.189, A.193, R.196, L.206, G.207, M.222, V.225, Q.315 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.193, A:L.206, A:V.225, A:Q.315 Hydrogen bonds: A:S.151, A:S.151, A:Q.155, A:G.207 Salt bridges: A:R.196 MYR.4: 12 residues within 4Å: Chain B: V.148, S.151, M.152, Q.155, A.193, R.196, L.206, G.207, M.222, S.226, I.229, I.316 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:V.148, B:L.206, B:M.222, B:I.229, B:I.316 Hydrogen bonds: B:S.151, B:S.151, B:Q.155, B:G.207 Salt bridges: B:R.196

4 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.21, C.24, C.38, C.41 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.21, A:C.24, A:C.38, A:C.41 ZN.3: 4 residues within 4Å: Chain A: C.57, C.63, C.73, C.76 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.57, A:C.63, A:C.73, A:C.76 ZN.5: 4 residues within 4Å: Chain B: C.21, C.24, C.38, C.41 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.21, B:C.24, B:C.38, B:C.41 ZN.6: 4 residues within 4Å: Chain B: C.57, C.63, C.73, C.76 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.57, B:C.63, B:C.73, B:C.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chandra, V. et al., Multidomain integration in the structure of the HNF-4 alpha nuclear receptor complex. Nature (2013)

Release Date

2013-03-20

Peptides

Hepatocyte nuclear factor 4-alpha: AB
Nuclear receptor coactivator 2: EF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

E
I

F
J

Hepatocyte nuclear factor 4-alpha

Nuclear receptor coactivator 2

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