SMTL ID : 4nco.1

Crystal Structure of the BG505 SOSIP gp140 HIV-1 Env trimer in Complex with the Broadly Neutralizing Fab PGT122

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 4.70 Å
Oligo State
hetero-3-3-3-3-mer
Ligands
12 x NAG- NAG- BMA- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)
3 x NAG- NAG- BMA- MAN- MAN- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
3 x MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose(Non-covalent)
30 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Julien, J.P. et al., Crystal structure of a soluble cleaved HIV-1 envelope trimer. Science (2013)
Release Date
2013-11-13
Peptides
BG505 SOSIP gp120: AEI
BG505 SOSIP gp41: BFJ
PGT122 light chain: CGK
PGT122 heavy chain: DHL
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
E
E
I
I
B
B
F
F
J
J
C
C
G
G
K
K
D
D
H
H
L
L