SMTL ID : 4nr7.1

Crystal structure of the bromodomain of human CREBBP in complex with an isoxazolyl-benzimidazole ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 4 residues within 4Å: Chain A: R.13, Q.14, M.17, P.18 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.13 EDO.2: 5 residues within 4Å: Chain A: K.63, Q.68, Y.69, Q.74, D.78 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.63, A:Q.68 Water bridges: A:K.63, A:D.78, A:D.78, A:D.78 EDO.3: 2 residues within 4Å: Chain A: P.28, E.29 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.29 Water bridges: A:K.102

1 x 2LO: 2-[2-(3-chloro-4-methoxyphenyl)ethyl]-5-(3,5-dimethyl-1,2-oxazol-4-yl)-1-[(2S)-2-(morpholin-4-yl)propyl]-1H-benzimidazole(Non-covalent)

2LO.4: 12 residues within 4Å: Chain A: L.31, P.32, F.33, V.37, L.42, I.44, Y.47, Y.89, N.90, R.95, V.96, F.99 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:P.32, A:P.32, A:F.33, A:L.42, A:L.42, A:I.44, A:Y.89, A:V.96, A:V.96 Hydrogen bonds: A:N.90 Water bridges: A:Y.47, A:R.95 pi-Cation interactions: A:R.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Filippakopoulos, P. et al., Crystal structure of the bromodomain of human CREBBP in complex with an isoxazolyl-benzimidazole ligand. To be Published

Release Date

2013-12-18

Peptides

CREB-binding protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CREB-binding protein

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