- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.02 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x 2CV: HEGA-10(Non-covalent)
- 4 x 12P: DODECAETHYLENE GLYCOL(Non-covalent)
12P.2: 8 residues within 4Å:- Chain A: M.23, L.27, Y.28, H.67, N.69, A.70, V.72, F.73
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.69
12P.8: 11 residues within 4Å:- Chain B: L.27, Y.28, H.67, N.69, A.70, V.72, F.73, I.78, M.79, T.82
- Chain C: F.89
2 PLIP interactions:1 interactions with chain C, 1 interactions with chain B- Hydrophobic interactions: C:F.89
- Hydrogen bonds: B:H.67
12P.11: 8 residues within 4Å:- Chain C: M.23, L.27, Y.28, H.67, N.69, A.70, V.72, F.73
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:Y.28, C:N.69
12P.17: 11 residues within 4Å:- Chain A: F.89
- Chain D: L.27, Y.28, H.67, N.69, A.70, V.72, F.73, I.78, M.79, T.82
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:F.89
- 8 x NA: SODIUM ION(Non-functional Binders)
NA.4: 5 residues within 4Å:- Chain A: E.53, S.54
- Ligands: NA.5, NA.13, NA.14
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:E.53, A:E.53, A:S.54
NA.5: 5 residues within 4Å:- Ligands: NA.4, NA.6, NA.13, NA.14, NA.15
No protein-ligand interaction detected (PLIP)NA.6: 5 residues within 4Å:- Ligands: NA.5, NA.9, NA.14, NA.15, NA.18
No protein-ligand interaction detected (PLIP)NA.9: 4 residues within 4Å:- Chain B: T.51
- Ligands: NA.6, NA.15, NA.18
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:T.51
NA.13: 5 residues within 4Å:- Chain C: E.53, S.54
- Ligands: NA.4, NA.5, NA.14
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:S.54, C:S.54
NA.14: 5 residues within 4Å:- Ligands: NA.4, NA.5, NA.6, NA.13, NA.15
No protein-ligand interaction detected (PLIP)NA.15: 5 residues within 4Å:- Ligands: NA.5, NA.6, NA.9, NA.14, NA.18
No protein-ligand interaction detected (PLIP)NA.18: 4 residues within 4Å:- Chain D: T.51
- Ligands: NA.6, NA.9, NA.15
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:T.51
- 2 x BR: BROMIDE ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bagneris, C. et al., Prokaryotic NavMs channel as a structural and functional model for eukaryotic sodium channel antagonism. Proc.Natl.Acad.Sci.USA (2014)
- Release Date
- 2014-06-04
- Peptides
- Ion transport protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.02 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x 2CV: HEGA-10(Non-covalent)
- 4 x 12P: DODECAETHYLENE GLYCOL(Non-covalent)
- 8 x NA: SODIUM ION(Non-functional Binders)
- 2 x BR: BROMIDE ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bagneris, C. et al., Prokaryotic NavMs channel as a structural and functional model for eukaryotic sodium channel antagonism. Proc.Natl.Acad.Sci.USA (2014)
- Release Date
- 2014-06-04
- Peptides
- Ion transport protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B - Membrane
-
We predict this structure to be a membrane protein.