- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.02 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x 2CV: HEGA-10(Non-covalent)
- 4 x 12P: DODECAETHYLENE GLYCOL(Non-covalent)
12P.2: 10 residues within 4Å:- Chain A: V.16, I.19, A.20, M.23, L.27, Y.28, N.69, A.70, V.72, F.73
No protein-ligand interaction detected (PLIP)12P.5: 7 residues within 4Å:- Chain B: A.20, M.23, L.27, Y.28, H.67, V.72, F.73
No protein-ligand interaction detected (PLIP)12P.10: 10 residues within 4Å:- Chain C: V.16, I.19, A.20, M.23, L.27, Y.28, N.69, A.70, V.72, F.73
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:Y.28
12P.13: 7 residues within 4Å:- Chain D: A.20, M.23, L.27, Y.28, H.67, V.72, F.73
No protein-ligand interaction detected (PLIP)- 8 x NA: SODIUM ION(Non-functional Binders)
NA.3: 3 residues within 4Å:- Ligands: NA.7, NA.11, NA.15
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:T.51
NA.6: 6 residues within 4Å:- Chain B: E.53
- Ligands: NA.7, NA.8, NA.14, NA.15, NA.16
No protein-ligand interaction detected (PLIP)NA.7: 5 residues within 4Å:- Ligands: NA.3, NA.6, NA.11, NA.14, NA.15
No protein-ligand interaction detected (PLIP)NA.8: 6 residues within 4Å:- Chain A: S.54
- Chain B: E.53, S.54
- Ligands: NA.6, NA.14, NA.16
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:E.53, B:E.53
NA.11: 3 residues within 4Å:- Ligands: NA.3, NA.7, NA.15
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:T.51
NA.14: 6 residues within 4Å:- Chain D: E.53
- Ligands: NA.6, NA.7, NA.8, NA.15, NA.16
No protein-ligand interaction detected (PLIP)NA.15: 5 residues within 4Å:- Ligands: NA.3, NA.6, NA.7, NA.11, NA.14
No protein-ligand interaction detected (PLIP)NA.16: 6 residues within 4Å:- Chain C: S.54
- Chain D: E.53, S.54
- Ligands: NA.6, NA.8, NA.14
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:S.54
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bagneris, C. et al., Prokaryotic NavMs channel as a structural and functional model for eukaryotic sodium channel antagonism. Proc.Natl.Acad.Sci.USA (2014)
- Release Date
- 2014-06-04
- Peptides
- Ion transport protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.02 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x 2CV: HEGA-10(Non-covalent)
- 4 x 12P: DODECAETHYLENE GLYCOL(Non-covalent)
- 8 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bagneris, C. et al., Prokaryotic NavMs channel as a structural and functional model for eukaryotic sodium channel antagonism. Proc.Natl.Acad.Sci.USA (2014)
- Release Date
- 2014-06-04
- Peptides
- Ion transport protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B - Membrane
-
We predict this structure to be a membrane protein.