SMTL ID : 4v01.1 (1 other biounit)

FGFR1 in complex with ponatinib (co-crystallisation).

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.33 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: R.14, W.15, E.16, L.17, L.44, L.92, G.93 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.16, A:L.44 SO4.2: 8 residues within 4Å: Chain A: S.141, V.145, F.238, N.268, C.269, T.270, L.273, T.305 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.141, A:N.268, A:T.270 SO4.3: 2 residues within 4Å: Chain A: G.83, K.84 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.84, A:K.84 Water bridges: A:K.84 SO4.4: 2 residues within 4Å: Chain A: R.14 Ligands: EDO.9 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.14

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 4 residues within 4Å: Chain A: M.78, K.162, C.163, I.164 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.164, A:I.164, A:R.166 EDO.6: 6 residues within 4Å: Chain A: W.228, V.232, Y.245, R.262, M.263, W.281 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:M.263 Water bridges: A:K.209, A:W.228 EDO.7: 5 residues within 4Å: Chain A: A.159, H.223, T.290, F.291, K.292 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:F.291, A:K.292 Water bridges: A:H.223 EDO.8: 5 residues within 4Å: Chain A: K.200, L.206, G.247, V.248, P.249 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.247 Water bridges: A:K.209, A:K.209, A:V.250 EDO.9: 3 residues within 4Å: Chain A: R.14, W.15 Ligands: SO4.4 No protein-ligand interaction detected (PLIP) EDO.10: 8 residues within 4Å: Chain A: Y.116, L.139, D.143, S.146, C.147, Q.150, N.179, M.181 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.146, A:Q.150, A:N.179

1 x 0LI: 3-(imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzam ide(Non-covalent)

0LI.11: 23 residues within 4Å: Chain A: L.28, V.36, A.56, V.57, K.58, E.75, M.78, M.79, I.82, I.89, V.105, E.106, Y.107, A.108, L.158, I.164, H.165, R.166, L.174, I.183, A.184, D.185, F.186 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.28, A:V.36, A:A.56, A:E.75, A:I.89, A:V.105, A:V.105, A:L.174, A:F.186 Hydrogen bonds: A:E.75, A:A.108, A:D.185 Salt bridges: A:D.185 Halogen bonds: A:I.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tucker, J.A. et al., Structural Insights Into Fgfr Kinase Isoform Selectivity: Diverse Binding Modes of Azd4547 and Ponatinib in Complex with Fgfr1 and Fgfr4. Structure (2014)

Release Date

2014-12-10

Peptides

FIBROBLAST GROWTH FACTOR RECEPTOR 1 (FMS-RELATED TYROSINE KINASE 2, PFEIFFER SYNDROME), ISOFORM CRA_B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

FIBROBLAST GROWTH FACTOR RECEPTOR 1 (FMS-RELATED TYROSINE KINASE 2, PFEIFFER SYNDROME), ISOFORM CRA_B

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