SMTL ID : 5o4a.1 (1 other biounit)

Human FGF in complex with a covalent inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: R.114, R.171, T.201, N.203, R.205 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:T.201, A:N.203 Water bridges: A:R.171, A:T.202, A:N.203 Salt bridges: A:R.114, A:R.171, A:R.205 SO4.2: 2 residues within 4Å: Chain A: G.83, K.84 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.84

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: Q.118, N.203, R.205, G.241, S.243 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.118, A:N.203, A:R.205, A:R.205

1 x 9K8: [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl 4-ethyl-3-fluorosulfonyl-benzoate(Covalent)

9K8.4: 14 residues within 4Å: Chain A: L.28, G.29, E.30, F.33, G.34, V.36, A.56, K.58, V.105, E.106, Y.107, A.108, L.174, D.185 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:V.36, A:E.106, A:A.108 Water bridges: A:G.111, A:R.171

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mukherjee, H. et al., A study of the reactivity of S(VI)-F containing warheads with nucleophilic amino-acid side chains under physiological conditions. Org. Biomol. Chem. (2017)

Release Date

2018-02-07

Peptides

Fibroblast growth factor receptor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fibroblast growth factor receptor 1

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