SMTL ID : 4wm0.1

Crystal structure of mouse Xyloside xylosyltransferase 1 complexed with acceptor ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.37 Å

Oligo State

hetero-1-1-mer

Ligands

1 x BGC- XYS: alpha-D-xylopyranose-(1-3)-beta-D-glucopyranose(Post Translational Modification)

BGC-XYS.1: 13 residues within 4Å: Chain A: E.169, Q.171, V.173, N.202, Q.244, C.270, W.272, W.273, N.298, C.299 Chain B: C.9, E.10, S.11 5 PLIP interactions: 1 interactions with chain B, 4 interactions with chain A Hydrogen bonds: B:S.11, A:Q.171, A:N.202, A:Q.244, A:C.299

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yu, H. et al., Notch-modifying xylosyltransferase structures support an SNi-like retaining mechanism. Nat.Chem.Biol. (2015)

Release Date

2015-09-30

Peptides

Xyloside xylosyltransferase 1: A
Coagulation factor IX: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

Xyloside xylosyltransferase 1

Coagulation factor IX

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