SMTL ID : 4yh3.1

Crystal structure of human BRD4(1) in complex with 4-[(2E)-3-(4-methoxyphenyl)-2-phenylprop-2-enoyl]-3,4-dihydroquinoxalin-2(1H)-one (compound 19a)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x Y80: 4-[(2E)-3-(4-methoxyphenyl)-2-phenylprop-2-enoyl]-3,4-dihydroquinoxalin-2(1H)-one(Non-covalent)

Y80.1: 10 residues within 4Å: Chain A: W.40, P.41, V.46, L.51, L.53, Y.56, Y.98, N.99, D.104, I.105 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:W.40, A:P.41, A:P.41, A:L.51, A:L.51, A:L.51, A:L.53, A:L.53, A:I.105, A:I.105 Hydrogen bonds: A:N.99, A:N.99, A:D.104 pi-Stacking: A:W.40

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Duffy, B.C. et al., Discovery of a new chemical series of BRD4(1) inhibitors using protein-ligand docking and structure-guided design. Bioorg.Med.Chem.Lett. (2015)

Release Date

2016-01-13

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

Related Entries With Identical Sequence