SMTL ID : 4zfr.1

Catalytic domain of Sst2 F403A mutant bound to ubiquitin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

hetero-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.118, C.159, H.166, H.168 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.118, A:C.159, A:H.166, A:H.168 ZN.2: 5 residues within 4Å: Chain A: H.103, H.105, S.113, D.116 Chain B: G.81 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.103, A:H.105, A:D.116, A:D.116

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 5 residues within 4Å: Chain A: G.143, I.144, M.175, V.176, Q.178 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.144, A:V.176, A:Q.178 EDO.4: 6 residues within 4Å: Chain A: T.98 Chain B: T.12, L.13, L.74, V.75, L.76 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:L.13, B:L.76, A:T.98, A:T.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shrestha, R.K., Structure of Catalytic domain of Sst2 F403A mutant bound to ubiquitin at 1.7 Angstroms. To Be Published

Release Date

2015-10-14

Peptides

AMSH-like protease sst2: A
ubiquitin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

AMSH-like protease sst2

ubiquitin

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