SMTL ID : 8htf.1

Crystal structure of an effector in complex with ubiquitin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 12 residues within 4Å: Chain A: L.21, R.22, T.23, S.25, S.54, A.55, T.56, H.67, R.73, D.91, T.176, E.177 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:H.67, A:E.177 Hydrogen bonds: A:T.23, A:T.23, A:S.25, A:S.25, A:S.54, A:R.73, A:E.177 Water bridges: A:R.22, A:S.25, A:D.29, A:E.30 Salt bridges: A:R.22, A:R.22, A:R.73

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tan, J. et al., Molecular basis of threonine ADP-ribosylation of ubiquitin by bacterial ARTs. Nat.Chem.Biol. (2024)

Release Date

2023-11-22

Peptides

NAD(+)--protein-threonine ADP-ribosyltransferase: A
Ubiquitin-40S ribosomal protein S27a (Fragment): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

NAD(+)--protein-threonine ADP-ribosyltransferase

Ubiquitin-40S ribosomal protein S27a (Fragment)

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