SMTL ID : 4zha.1

Factor Xa complex with GTC000102

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.86 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.56, N.58, Q.61, E.63, E.66 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.56, A:N.58, A:Q.61, A:E.63, A:E.66, H2O.5

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: Y.173, D.174, R.211, K.214 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:Y.173, A:D.174, A:R.211, H2O.2, H2O.3

1 x 4O5: 4-[(3S)-3-({[(E)-2-(5-chlorothiophen-2-yl)ethenyl]sulfonyl}amino)-2-oxo-2,3-dihydro-1H-pyrrol-1-yl]-3-fluoro-N-methylbenzamide(Non-covalent)

4O5.3: 15 residues within 4Å: Chain A: T.84, Y.85, F.162, D.179, A.180, C.181, Q.182, V.203, W.205, G.206, G.208, C.209, G.216, I.217, Y.218 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:A.180, A:W.205, A:W.205 Hydrogen bonds: A:G.206 pi-Stacking: A:Y.85, A:F.162

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Convery, M.A., Factor Xa complex with GTC000102. To Be Published

Release Date

2016-01-13

Peptides

Coagulation factor X: A
Coagulation factor X: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Coagulation factor X

Coagulation factor X

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