SMTL ID : 5avi.1

Crystal structure of LXRalpha in complex with tert-butyl benzoate analog, compound 4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-2-2-mer

Ligands

2 x 4KM: tert-butyl 2-[[4-[ethanoyl(methyl)amino]phenoxy]methyl]-5-(trifluoromethyl)benzoate(Non-covalent)

4KM.1: 21 residues within 4Å: Chain A: F.93, T.94, L.96, A.97, S.100, I.131, M.134, L.135, E.137, T.138, R.141, F.151, F.162, L.167, F.171, I.175, H.257, Q.260, L.264, L.271, W.279 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.93, A:T.94, A:L.96, A:A.97, A:M.134, A:L.135, A:E.137, A:F.151, A:F.162, A:L.167, A:I.175 4KM.2: 21 residues within 4Å: Chain C: F.93, T.94, L.96, A.97, S.100, I.131, M.134, L.135, E.137, T.138, R.141, F.151, F.162, L.167, F.171, I.175, H.257, Q.260, L.264, L.271, W.279 10 PLIP interactions: 10 interactions with chain C Hydrophobic interactions: C:F.93, C:T.94, C:L.96, C:A.97, C:M.134, C:L.135, C:E.137, C:F.151, C:F.162, C:I.175

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matsui, Y. et al., Discovery and structure-guided optimization of tert-butyl 6-(phenoxymethyl)-3-(trifluoromethyl)benzoates as liver X receptor agonists. Bioorg.Med.Chem.Lett. (2015)

Release Date

2015-08-26

Peptides

Oxysterols receptor LXR-alpha: AC
Nuclear receptor coactivator 1: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

Oxysterols receptor LXR-alpha

Nuclear receptor coactivator 1

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