SMTL ID : 5avl.1

Crystal structure of LXRalpha in complex with tert-butyl benzoate analog, compound 32b

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-2-2-mer

Ligands

2 x 4KQ: 2-[4-[4-[[2-[(2-methylpropan-2-yl)oxycarbonyl]-3-oxidanyl-4-(trifluoromethyl)phenyl]methoxy]phenyl]phenyl]ethanoic acid(Non-covalent)

4KQ.1: 22 residues within 4Å: Chain A: F.90, F.93, T.94, L.96, A.97, S.100, I.131, M.134, L.135, T.138, R.141, F.151, L.152, F.162, L.167, F.171, I.175, H.257, Q.260, L.264, L.271, W.279 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.93, A:T.94, A:L.96, A:A.97, A:M.134, A:F.151, A:L.152, A:F.162, A:L.167, A:I.175 Hydrogen bonds: A:L.152 Salt bridges: A:R.141 4KQ.2: 22 residues within 4Å: Chain C: F.90, F.93, T.94, L.96, A.97, S.100, I.131, M.134, L.135, T.138, R.141, F.151, L.152, F.162, L.167, F.171, I.175, H.257, Q.260, L.264, L.271, W.279 12 PLIP interactions: 12 interactions with chain C Hydrophobic interactions: C:F.93, C:T.94, C:L.96, C:A.97, C:M.134, C:F.151, C:L.152, C:F.162, C:L.167, C:I.175 Hydrogen bonds: C:L.152 Salt bridges: C:R.141

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matsui, Y. et al., Discovery and structure-guided optimization of tert-butyl 6-(phenoxymethyl)-3-(trifluoromethyl)benzoates as liver X receptor agonists. Bioorg.Med.Chem.Lett. (2015)

Release Date

2015-08-26

Peptides

Oxysterols receptor LXR-alpha: AC
Nuclear receptor coactivator 1: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B

Oxysterols receptor LXR-alpha

Nuclear receptor coactivator 1

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