SMTL ID : 5cgb.2 (1 other biounit)

Crystal structure of FimH in complex with heptyl alpha-D-septanoside

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x 51C: (6R)-1,6-anhydro-2-O-heptyl-6-(hydroxymethyl)-D-galactitol(Non-covalent)

51C.1: 14 residues within 4Å: Chain A: F.1, I.13, G.14, N.46, D.47, Y.48, I.52, D.54, Q.133, N.135, Y.137, N.138, D.140, F.142 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.48 Hydrogen bonds: A:F.1, A:D.47, A:Y.48, A:D.54, A:Q.133, A:Q.133, A:N.135, A:D.140 Water bridges: A:F.1, A:Q.133

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: P.91, R.92 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.92 Salt bridges: A:R.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sager, C.P. et al., The price of flexibility - a case study on septanoses as pyranose mimetics. Chem Sci (2018)

Release Date

2016-07-20

Peptides

Protein FimH: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Protein FimH

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