SMTL ID : 8bvd.1 (3 other biounits)

FimH lectin domain in complex with mannose C-linked to quinoline

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x RLO: (2R,3S,4R,5S,6R)-2-(hydroxymethyl)-6-[(E)-3-quinolin-6-ylprop-2-enyl]oxane-3,4,5-triol(Non-covalent)

RLO.1: 12 residues within 4Å: Chain A: F.1, I.13, N.46, D.47, Y.48, I.52, D.54, Q.133, N.135, Y.137, D.140, F.142 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.48, A:I.52 Hydrogen bonds: A:F.1, A:F.1, A:N.46, A:D.47, A:Y.48, A:Q.133, A:N.135, A:D.140 Water bridges: A:G.14 pi-Stacking: A:Y.48, A:Y.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mousavifar, L. et al., Insightful Improvement in the Design of Potent Uropathogenic E. coli FimH Antagonists. To Be Published (2023)

Release Date

2023-02-15

Peptides

Type 1 fimbrin D-mannose specific adhesin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Type 1 fimbrin D-mannose specific adhesin

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