SMTL ID : 5ctl.1

Crystal Structure of the first bromodomain of human BRD4 in complex with benzo[cd]indol-2(1H)-one ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.51 Å

Oligo State

monomer

Ligands

1 x EB9: N-(1-ethyl-2-oxo-1,2-dihydrobenzo[cd]indol-6-yl)benzenesulfonamide(Non-covalent)

EB9.1: 12 residues within 4Å: Chain A: W.54, P.55, F.56, V.60, L.65, L.67, Y.70, Y.112, N.113, D.118, I.119, M.122 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:W.54, A:P.55, A:P.55, A:F.56, A:L.65, A:L.67, A:L.67, A:Y.112, A:D.118, A:I.119 Hydrogen bonds: A:N.113

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xue, X. et al., Discovery of Benzo[cd]indol-2(1H)-ones as Potent and Specific BET Bromodomain Inhibitors: Structure-Based Virtual Screening, Optimization, and Biological Evaluation. J.Med.Chem. (2016)

Release Date

2016-01-13

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

Related Entries With Identical Sequence