SMTL ID : 5cvf.1

Crystal Structure of CK2alpha with Compound 5 bound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.63 Å

Oligo State

monomer

Ligands

1 x 54Z: 1-[3-chloro-4-(trifluoromethoxy)phenyl]methanamine(Non-covalent)

54Z.1: 10 residues within 4Å: Chain A: N.117, L.123, L.127, Y.135, I.139, P.158, V.161, I.163, M.220, M.224 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.123, A:V.161, A:I.163 Hydrogen bonds: A:V.161 Water bridges: A:N.117

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.2: 14 residues within 4Å: Chain A: R.46, G.47, Y.49, S.50, V.52, V.65, K.67, I.94, E.113, V.115, N.160, M.162, I.173, D.174 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:S.50, A:S.50, A:E.113, A:V.115, A:N.117, A:D.174 Water bridges: A:N.160, A:D.174, A:D.174, A:D.174, A:D.174 Salt bridges: A:K.67, A:K.67

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 5 residues within 4Å: Chain A: R.79, R.154, L.177, N.188, R.190 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:N.188 Water bridges: A:R.154 Salt bridges: A:K.76, A:R.79, A:R.154 ACT.4: 4 residues within 4Å: Chain A: R.190, V.191, A.192, K.197 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.190 Salt bridges: A:K.197

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brear, P. et al., Specific inhibition of CK2 alpha from an anchor outside the active site. Chem Sci (2016)

Release Date

2016-07-27

Peptides

Casein kinase II subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Casein kinase II subunit alpha

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