SMTL ID : 5d3n.1

First bromodomain of BRD4 bound to inhibitor XD40

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

1 x L40: 4-acetyl-3-ethyl-5-methyl-N-[2-methyl-5-(methylsulfamoyl)phenyl]-1H-pyrrole-2-carboxamide(Non-covalent)

L40.1: 12 residues within 4Å: Chain A: W.39, P.40, F.41, Q.43, V.45, K.49, L.50, L.52, Y.55, Y.97, N.98, I.104 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:W.39, A:F.41, A:L.50, A:L.50, A:L.52, A:Y.55, A:Y.97, A:I.104 Hydrogen bonds: A:P.40, A:K.49, A:N.98 Water bridges: A:Q.43 pi-Stacking: A:W.39

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hugle, M. et al., 4-Acyl Pyrrole Derivatives Yield Novel Vectors for Designing Inhibitors of the Acetyl-Lysine Recognition Site of BRD4(1). J.Med.Chem. (2016)

Release Date

2016-01-20

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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