SMTL ID : 5giy.1

HSA-Palmitic acid-[RuCl5(ind)]2-

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.54 Å

Oligo State

monomer

Ligands

6 x PLM: PALMITIC ACID(Non-covalent)(Covalent)

PLM.1: 8 residues within 4Å: Chain A: L.113, R.115, L.133, Y.136, L.137, A.156, Y.159, F.163 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Y.136, A:Y.136, A:A.156, A:Y.159, A:Y.159, A:Y.159, A:F.163 Hydrogen bonds: A:L.113 Salt bridges: A:R.115 PLM.2: 14 residues within 4Å: Chain A: R.8, L.12, L.20, V.21, V.44, L.64, L.67, Y.148, L.249, A.252, R.255, L.281, L.282, S.285 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.12, A:L.12, A:L.20, A:V.21, A:V.44, A:L.64, A:L.67, A:L.249, A:A.252, A:L.282 Hydrogen bonds: A:Y.148, A:S.285, A:S.285 Salt bridges: A:R.255 PLM.3: 12 residues within 4Å: Chain A: S.340, V.342, R.346, P.382, L.385, N.389, L.428, V.431, G.432, L.451, R.483 Ligands: PLM.4 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.342, A:L.385, A:V.431 Hydrogen bonds: A:S.340 Salt bridges: A:R.346, A:R.483 PLM.4: 10 residues within 4Å: Chain A: L.385, R.408, Y.409, V.416, L.458, H.462, R.483, F.486, S.487 Ligands: PLM.3 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.409, A:Y.409, A:Y.409, A:V.416, A:L.458, A:L.458, A:H.462, A:F.486, A:F.486 Hydrogen bonds: A:R.408, A:Y.409, A:Y.409 Salt bridges: A:K.412 PLM.5: 13 residues within 4Å: Chain A: Y.399, F.500, F.505, K.523, A.526, L.527, L.530, H.533, V.545, M.546, F.549, S.577, Q.578 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.500, A:A.526, A:L.527, A:L.530, A:V.545, A:F.549, A:F.549, A:Q.578 Hydrogen bonds: A:Y.399, A:N.403 Salt bridges: A:K.523 PLM.6: 12 residues within 4Å: Chain A: R.207, A.208, K.210, A.211, V.214, S.230, D.322, L.325, G.326, L.345, K.349, E.352 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:A.208, A:K.210, A:A.211, A:L.325 Salt bridges: A:R.207, A:K.349

2 x 7GE: pentakis(chloranyl)-(1~{H}-indazol-2-ium-2-yl)ruthenium(1-)(Covalent)(Non-covalent)

7GE.7: 7 residues within 4Å: Chain A: H.144, F.147, F.155, Y.159, G.187, K.188, S.191 2 PLIP interactions: 2 interactions with chain A pi-Stacking: A:H.144 Metal complexes: A:H.144 7GE.8: 9 residues within 4Å: Chain A: K.197, R.216, L.236, H.240, R.255, L.258, S.285, I.288, A.289 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:A.289 Hydrogen bonds: A:H.240, A:R.255 Metal complexes: A:H.240

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, F. et al., Structure of HSA-Palmitic acid-[RuCl5(ind)]2-. To Be Published

Release Date

2017-07-19

Peptides

Serum albumin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serum albumin

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