SMTL ID : 5gk6.1

Structure of E.Coli fructose 1,6-bisphosphate aldolase, Citrate bound form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: H.111, H.265 Ligands: CIT.2 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.111, A:H.265, H2O.2 ZN.4: 3 residues within 4Å: Chain B: H.111, H.265 Ligands: CIT.5 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.111, B:H.265, H2O.11

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.2: 5 residues within 4Å: Chain A: H.111, H.265, G.266, N.287 Ligands: ZN.1 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.266 Water bridges: A:N.287, A:N.287, A:D.289 Salt bridges: A:H.111, A:H.111, A:H.265, A:H.265 CIT.5: 5 residues within 4Å: Chain B: H.111, H.265, G.266, N.287 Ligands: ZN.4 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:G.266, B:G.267 Water bridges: B:G.266, B:S.268, B:N.287, B:N.287, B:D.289 Salt bridges: B:H.111, B:H.111, B:H.265, B:H.265

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 7 residues within 4Å: Chain A: S.89, H.92, H.93 Chain B: S.89, H.92, H.93, Q.96 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:H.92, B:H.92 Water bridges: B:Q.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tran, T.H. et al., Structure of E.Coli fructose 1,6-bisphosphate aldolase, Citrate bound form. To Be Published

Release Date

2017-07-05

Peptides

Fructose-bisphosphate aldolase class 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Fructose-bisphosphate aldolase class 2

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