SMTL ID : 5gm6.1

Cryo-EM structure of the activated spliceosome (Bact complex) at 3.5 angstrom resolution

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY 3.50 Å
Oligo State
hetero-oligomer
Ligands
1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
5 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
13 x ZN: ZINC ION(Non-covalent)
1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Yan, C. et al., Structure of a yeast activated spliceosome at 3.5 angstrom resolution. Science (2016)
Release Date
2016-09-21
Peptides
Pre-mRNA-splicing factor 8: A
Pre-mRNA-splicing helicase BRR2: B
Pre-mRNA-splicing factor SNU114: C
Pre-mRNA-splicing factor RSE1: F
Cold sensitive U2 snRNA suppressor 1: G
Pre-mRNA-splicing factor PRP11: H
Pre-mRNA-splicing factor RDS3: I
RDS3 complex subunit 10: J
Pre-mRNA-splicing factor PRP46: N
Pre-mRNA-processing protein 45: O
Pre-mRNA-splicing factor SLT11: P
Pre-mRNA-splicing factor CWC2: Q
Pre-mRNA-splicing factor CWC15: R
Pre-mRNA-splicing factor BUD31: S
Pre-mRNA leakage protein 1: T
U2 snRNP component IST3: U
Pre-mRNA-splicing factor CWC26: V
Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2: W
Pre-mRNA-splicing factor CWC22: X
Pre-mRNA-splicing factor CWC24: Y
Peptidyl-prolyl isomerase CWC27: Z
Pre-mRNA-splicing factor CEF1: 0
U2 snRNP component HSH155: 1
Pre-mRNA-splicing factor CLF1: 2
Pre-mRNA-splicing factor CWC21: 3
Pre-mRNA-splicing factor SYF1: 4
Protein HSH49: 5
Pre-mRNA-splicing factor SYF2: 6
Pre-mRNA-processing factor 19: 789a
Pre-mRNA-splicing factor SNT309: b
Pre-mRNA-processing factor 17: c
Small nuclear ribonucleoprotein-associated protein B: d
Small nuclear ribonucleoprotein E: e
Small nuclear ribonucleoprotein F: f
Small nuclear ribonucleoprotein G: g
Small nuclear ribonucleoprotein Sm D3: h
Small nuclear ribonucleoprotein Sm D1: i
Small nuclear ribonucleoprotein Sm D2: j
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
F
F
G
H
H
I
I
J
J
K
N
O
O
P
P
Q
Q
R
R
S
S
T
T
U
U
V
V
W
W
Y
X
Z
Y
a
Z
b
0
c
1
G
2
d
3
X
4
v
5
e
6
f
7
o
8
p
9
q
a
r
b
t
c
n
d
k
e
i
f
h
g
j
h
l
i
m
j
g

Pre-mRNA-splicing factor 8

Pre-mRNA-splicing helicase BRR2

Pre-mRNA-splicing factor SNU114

Pre-mRNA-splicing factor RSE1

Cold sensitive U2 snRNA suppressor 1

Pre-mRNA-splicing factor PRP11

Pre-mRNA-splicing factor RDS3

RDS3 complex subunit 10

Pre-mRNA-splicing factor PRP46

Pre-mRNA-processing protein 45

Pre-mRNA-splicing factor SLT11

Pre-mRNA-splicing factor CWC2

Pre-mRNA-splicing factor CWC15

Pre-mRNA-splicing factor BUD31

Pre-mRNA leakage protein 1

U2 snRNP component IST3

Pre-mRNA-splicing factor CWC26

Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2

Pre-mRNA-splicing factor CWC22

Pre-mRNA-splicing factor CWC24

Peptidyl-prolyl isomerase CWC27

Pre-mRNA-splicing factor CEF1

U2 snRNP component HSH155

Pre-mRNA-splicing factor CLF1

Pre-mRNA-splicing factor CWC21

Pre-mRNA-splicing factor SYF1

Protein HSH49

Pre-mRNA-splicing factor SYF2

Pre-mRNA-processing factor 19

Pre-mRNA-splicing factor SNT309

Pre-mRNA-processing factor 17

Small nuclear ribonucleoprotein-associated protein B

Small nuclear ribonucleoprotein E

Small nuclear ribonucleoprotein F

Small nuclear ribonucleoprotein G

Small nuclear ribonucleoprotein Sm D3

Small nuclear ribonucleoprotein Sm D1

Small nuclear ribonucleoprotein Sm D2

Related Entries With Identical Sequence

3jcm.1 | 5gam.1 | 5gan.1 | 5gao.1 | 5gap.1 | 5gmk.1 | 5lj3.1 | 5lj5.1 | 5m52.1 | 5m52.2 | 5mps.1 | 5mq0.1 | 5nrl.1 | 5uz5.1 | 5wsg.1 | 5y88.1 | 5ylz.1 | 5zwm.1 | 5zwn.1 | 5zwo.1 | 6bk8.1 | 6exn.1 | 6g90.1 | 6j6g.1 | 6j6h.1 | 6j6n.1 | 6j6q.1